Basic Information
Locus ID:
Thhalv10016175m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_10 | 4926606 | 4932152 | - | Thhalv10016175m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 112,295.25 Da | 26.63 | 98.73 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 687 | 950 | 4.28169E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 684 | 949 | 1.6E-46 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 422 | 600 | 1.1E-38 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 88 | 407 | 2.99E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 664 | 981 | 3.28E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 645 | 756 | 7.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 271 | 9.9E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 397 | 4.4E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 757 | 964 | 1.5E-57 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 422 | 602 | 5.4E-32 | - |
| SMART | SM00220 | serkin_6 | 681 | 928 | 1.4E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 956 | 37.827545 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 802 | 814 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 709 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_024016702.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Eutrema salsugineum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | V4M5I1 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016175mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology