Basic Information
Locus ID:
Thhalv10015788m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 7117086 | 7117757 | - | Thhalv10015788m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 26,405.89 Da | 50.46 | 86.95 | -0.23 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21130.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_024011739.1 | uncharacterized protein LOC18017317 [Eutrema salsugineum] | 0 |
| Q9LJB9 | Putative F-box protein At3g21130 OS=Arabidopsis thaliana OX=3702 GN=At3g21130 PE=4 SV=1 | 0 | |
| TrEMBL | V4N8Q6 | FBA_1 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10015788mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 7 | AT1G77650.1, AT1G77655.1, AT3G08750.1, AT3G10430.1 ... |
| Brassicaceae | Eutrema salsugineum | 9 | Thhalv10000601m.g.v1.0, Thhalv10015788m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g20410.v2.2, Sp6g23470.v2.2 |
| Brassicaceae | Brassica nigra | 17 | BniB01g054610.2N, BniB03g013050.2N, BniB03g013060.2N ... |