Basic Information
Locus ID:
Thhalv10015744m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
lectin protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 712073 | 714217 | - | Thhalv10015744m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 77,011.45 Da | 42.28 | 86.69 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 379 | 650 | 9.09157E-92 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 51 | 257 | 5.69701E-78 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 36 | 267 | 3.0E-59 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 374 | 579 | 8.8E-48 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 268 | 1.54E-60 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 650 | 4.45E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 449 | 671 | 7.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 448 | 3.6E-31 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 33 | 272 | 1.4E-66 | - |
| SMART | SM00220 | serkin_6 | 373 | 651 | 3.0E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 659 | 38.633183 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 492 | 504 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 402 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 303 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03140.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_006398761.2 | L-type lectin-domain containing receptor kinase VIII.2 [Eutrema salsugineum] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 0 | |
| TrEMBL | V4L991 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10015744mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology