Basic Information
Locus ID:
Thhalv10015728m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 4741135 | 4742435 | - | Thhalv10015728m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 40,936.17 Da | 45.10 | 71.89 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 197 | 7.3E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 44 | 215 | 4.97E-35 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 220 | 4.2E-27 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 215 | 31.263437 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14490.1 | NAC domain containing protein 85. | 0 |
| RefSeq | XP_024012253.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Eutrema salsugineum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LCH5 | NAC domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10015728mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology