Basic Information
Locus ID:
Thhalv10015519m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 10208077 | 10208960 | - | Thhalv10015519m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 11,376.77 Da | 47.86 | 53.13 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 17 | 85 | 3.1E-17 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 12 | 92 | 2.05E-21 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 92 | 2.3E-27 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 14 | 92 | 14.904471 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55856.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_024012635.1 | LOW QUALITY PROTEIN: putative small ubiquitin-related modifier 8 [Eutrema salsugineum] | 0 |
| B3H5R8 | Putative small ubiquitin-related modifier 8 OS=Arabidopsis thaliana OX=3702 GN=SUMO8 PE=1 SV=1 | 0 | |
| TrEMBL | V4LSJ9 | Ubiquitin-like domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10015519mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology