Basic Information
Locus ID:
Thhalv10014708m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 4537972 | 4539674 | + | Thhalv10014708m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 21,949.19 Da | 40.76 | 78.04 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 167 | 203 | 1.11182E-16 | - |
| Pfam | PF01849 | NAC domain | 60 | 115 | 2.7E-23 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 165 | 203 | 1.8E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 165 | 202 | 8.9E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 66 | 119 | 5.8E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 60 | 116 | 4.8E-27 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 24 | 204 | 6.8E-63 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 57 | 122 | 18.178352 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 67 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_006399887.1 | nascent polypeptide-associated complex subunit alpha-like protein 3 isoform X1 [Eutrema salsugineum] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | V4KTQ9 | NAC-A/B domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10014708mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology