Basic Information
Locus ID:
Thhalv10014040m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 3692846 | 3694453 | - | Thhalv10014040m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 38,186.60 Da | 46.24 | 87.69 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 64 | 327 | 1.5E-29 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 329 | 5.9E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 137 | 336 | 1.2E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 27 | 136 | 1.1E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 334 | 25.347221 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11410.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006399645.1 | putative inactive serine/threonine-protein kinase At5g11400 [Eutrema salsugineum] | 0 |
| Q9LFL6 | Inactive serine/threonine-protein kinase BKN2 OS=Arabidopsis thaliana OX=3702 GN=BKN2 PE=1 SV=1 | 0 | |
| TrEMBL | V4LMN9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10014040mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G11400.2, AT5G11410.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10014040m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g32190.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g005150.2N |