Basic Information
Locus ID:
Thhalv10013529m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Contains the following InterPro domains Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro IPR015609), Heat shock protein DnaJ, N-terminal (InterPro IPR001623), Heat shock protein DnaJ (InterPro IPR003095)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 11978387 | 11981360 | - | Thhalv10013529m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 50,429.04 Da | 49.12 | 63.03 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 7.74515E-22 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 1.8E-21 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 42 | 126 | 3.01E-23 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 55 | 147 | 1.0E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 3.1E-25 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 17.405771 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 3.1E-14 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 3.1E-14 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 3.1E-14 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 292 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.5 | - | 0 |
| RefSeq | XP_006401739.1 | uncharacterized protein LOC18017878 [Eutrema salsugineum] | 0 |
| Q8WW22 | DnaJ homolog subfamily A member 4 OS=Homo sapiens OX=9606 GN=DNAJA4 PE=1 SV=1 | 0 | |
| TrEMBL | V4LL50 | J domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013529mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology