Basic Information
Locus ID:
Thhalv10013432m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 8673596 | 8675913 | - | Thhalv10013432m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 53,400.06 Da | 40.84 | 79.24 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 158 | 426 | 2.33702E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 153 | 427 | 2.3E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 125 | 429 | 3.64E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 229 | 5.0E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 230 | 451 | 1.9E-55 | - |
| SMART | SM00220 | serkin_6 | 152 | 428 | 1.3E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 152 | 428 | 40.046581 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 274 | 286 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 158 | 184 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58940.1 | calmodulin-binding receptor-like cytoplasmic kinase 1. Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA | 0 |
| RefSeq | XP_006401023.1 | calmodulin-binding receptor-like cytoplasmic kinase 1 isoform X2 [Eutrema salsugineum] | 0 |
| Q9FIL7 | Calmodulin-binding receptor-like cytoplasmic kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRCK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4N9N2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013432mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology