Basic Information
Locus ID:
Thhalv10013401m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 6296837 | 6299954 | + | Thhalv10013401m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 54,179.57 Da | 47.54 | 84.75 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 172 | 438 | 3.21836E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 167 | 433 | 1.0E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 140 | 440 | 7.72E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 148 | 241 | 1.5E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 453 | 2.9E-63 | - |
| SMART | SM00220 | serkin_6 | 166 | 437 | 1.7E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 166 | 424 | 37.742741 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 172 | 195 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 288 | 300 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 484 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_024011503.1 | probable receptor-like protein kinase At5g18500 [Eutrema salsugineum] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | V4LHF7 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013401mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology