Basic Information
Locus ID:
Thhalv10013257m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 8670779 | 8673466 | + | Thhalv10013257m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 58,717.58 Da | 47.67 | 75.72 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 211 | 460 | 1.57505E-120 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 211 | 460 | 4.5E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 196 | 460 | 1.09E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 192 | 287 | 1.2E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 288 | 493 | 1.1E-61 | - |
| SMART | SM00220 | serkin_6 | 204 | 464 | 3.8E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 204 | 464 | 42.421093 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 328 | 340 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 387 | 409 | 2.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 431 | 453 | 2.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 322 | 340 | 2.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 368 | 378 | 2.3E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 284 | 297 | 2.3E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 72 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006401022.1 | serine/threonine-protein kinase HT1 [Eutrema salsugineum] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LFH6 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013257mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology