Basic Information
Locus ID:
Thhalv10013170m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
CPK7
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 4122132 | 4125280 | - | Thhalv10013170m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 61,668.41 Da | 39.16 | 81.86 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 449 | 512 | 1.78392E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 58 | 347 | 3.3579E-137 | - |
| Pfam | PF13499 | EF-hand domain pair | 378 | 436 | 8.4E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 273 | 348 | 4.0E-8 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 59 | 260 | 8.3E-64 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 448 | 512 | 2.0E-16 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 362 | 538 | 1.84E-42 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 58 | 363 | 3.37E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 145 | 353 | 2.2E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 144 | 3.0E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 354 | 514 | 1.1E-45 | - |
| SMART | SM00054 | efh_1 | 377 | 405 | 3.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 449 | 477 | 0.0034 | IPR002048 |
| SMART | SM00054 | efh_1 | 486 | 514 | 4.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 413 | 441 | 1.4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 59 | 348 | 5.3E-105 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 445 | 480 | 13.592857 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 373 | 408 | 13.14653 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 482 | 517 | 14.652882 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 409 | 444 | 9.185384 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 348 | 48.682457 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 495 | 507 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 458 | 470 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 422 | 434 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| Coils | Coil | Coil | 464 | 484 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_024012406.1 | LOW QUALITY PROTEIN: calcium-dependent protein kinase 7 [Eutrema salsugineum] | 0 |
| Q38873 | Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 | 0 | |
| TrEMBL | V4KTE2 | Calcium-dependent protein kinase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013170mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology