Basic Information
Locus ID:
Thhalv10013122m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
DRM2
Description:
Domains rearranged methyltransferase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 4784024 | 4787041 | - | Thhalv10013122m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 63,549.29 Da | 40.60 | 81.48 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 440 | 554 | 4.7E-9 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 244 | 436 | 1.55E-21 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 436 | 557 | 2.07E-16 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 234 | 328 | 1.9E-5 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 31 | 85 | 6.7E-8 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 432 | 565 | 2.2E-26 | - |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 385 | 419 | 3.6E-5 | - |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 234 | 563 | 132.88559 | IPR030380 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 43 | 84 | 8.980523 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 210 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_006399976.2 | DNA (cytosine-5)-methyltransferase DRM2 isoform X1 [Eutrema salsugineum] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | V4LCI9 | SAM-dependent MTase DRM-type domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10013122mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology