Basic Information
Locus ID:
Thhalv10012966m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 5570119 | 5572660 | + | Thhalv10012966m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 67,487.42 Da | 40.77 | 95.05 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 350 | 609 | 4.9E-33 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 61 | 1.4E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 205 | 5.53E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 612 | 5.68E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 421 | 622 | 2.3E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 179 | 4.4E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 420 | 1.2E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 222 | 1.7E-5 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 616 | 30.053843 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16590.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006400197.1 | probable inactive receptor kinase At5g16590 [Eutrema salsugineum] | 0 |
| Q9FMD7 | Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana OX=3702 GN=At5g16590 PE=1 SV=1 | 0 | |
| TrEMBL | V4KUL7 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012966mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology