Basic Information
Locus ID:
Thhalv10012730m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 6994671 | 6998279 | - | Thhalv10012730m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 88,951.98 Da | 51.23 | 85.83 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 135 | 383 | 1.30279E-119 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 507 | 773 | 2.5E-111 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 166 | 315 | 2.9E-21 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 153 | 301 | 2.26E-21 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 131 | 378 | 3.4E-54 | IPR027417 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 163 | 393 | 28.282152 | IPR006703 |
| Coils | Coil | Coil | 410 | 437 | - | - |
| Coils | Coil | Coil | 476 | 496 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_006400598.1 | translocase of chloroplast 90, chloroplastic [Eutrema salsugineum] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | V4N8N3 | AIG1-type G domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012730mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology