Basic Information
Locus ID:
Thhalv10012708m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 952969 | 958476 | - | Thhalv10012708m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 89,776.57 Da | 49.59 | 82.18 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 551 | 799 | 7.46845E-131 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 206 | 410 | 3.4E-78 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 545 | 798 | 8.7E-72 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 536 | 799 | 2.83E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 624 | 814 | 5.4E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 538 | 623 | 1.5E-39 | - |
| SMART | SM00220 | serkin_6 | 545 | 803 | 5.2E-67 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 545 | 803 | 46.209007 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 666 | 678 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 551 | 572 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 619 | 632 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 660 | 678 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 770 | 792 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 726 | 748 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 707 | 717 | 1.9E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_006398831.1 | serine/threonine-protein kinase CTR1 [Eutrema salsugineum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | V4L9E3 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012708mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology