Basic Information
Locus ID:
Thhalv10012693m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 9642595 | 9647795 | + | Thhalv10012693m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 89,185.22 Da | 59.03 | 85.98 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 563 | 830 | 4.92339E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 560 | 830 | 2.8E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 536 | 830 | 7.65E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 633 | 831 | 8.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 521 | 632 | 1.0E-34 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 557 | 831 | 38.604912 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 563 | 585 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 679 | 691 | - | IPR008271 |
| PRINTS | PR01217 | Proline rich extensin signature | 189 | 214 | 3.5E-9 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 79 | 91 | 3.5E-9 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 29 | 41 | 3.5E-9 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 119 | 140 | 3.5E-9 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 161 | 178 | 3.5E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 138 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006401272.2 | LOW QUALITY PROTEIN: receptor-like serine/threonine-protein kinase ALE2 [Eutrema salsugineum] | 0 |
| Q8RWW0 | Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A565CRA1 | Protein kinase domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS26692 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology