Basic Information
Locus ID:
Thhalv10012602m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 887776 | 890831 | + | Thhalv10012602m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 102,673.74 Da | 49.54 | 76.36 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 544 | 901 | 1.04921E-166 | - |
| Pfam | PF00069 | Protein kinase domain | 547 | 697 | 6.2E-35 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 780 | 883 | 2.5E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 534 | 899 | 1.97E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 544 | 625 | 1.6E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 892 | 8.8E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 626 | 694 | 1.6E-48 | - |
| SMART | SM00220 | serkin_6 | 546 | 883 | 1.5E-89 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 546 | 883 | 43.212597 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 667 | 679 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 117 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03640.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006398819.1 | protein kinase PVPK-1 [Eutrema salsugineum] | 0 |
| Q9SJM3 | Serine/threonine-protein kinase KIPK2 OS=Arabidopsis thaliana OX=3702 GN=KIPK2 PE=1 SV=1 | 0 | |
| TrEMBL | V4LCZ6 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012602mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G03640.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012602m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g39110.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g056920.2N |