Basic Information
Locus ID:
Thhalv10012584m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 19083825 | 19088614 | - | Thhalv10012584m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 105,931.00 Da | 31.55 | 94.86 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 677 | 932 | 2.7974E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 63 | 1.1E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 660 | 927 | 9.7E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 645 | 939 | 3.91E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 381 | 4.42E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 630 | 734 | 2.6E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 427 | 3.0E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 183 | 1.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 284 | 1.3E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 735 | 948 | 2.3E-54 | - |
| SMART | SM00369 | LRR_typ_2 | 137 | 161 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 288 | 313 | 8.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 287 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 659 | 933 | 1.1E-30 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 267 | 289 | 7.76586 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 659 | 933 | 37.968884 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 665 | 687 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 779 | 791 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 944 | 964 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024011808.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Eutrema salsugineum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LIZ5 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012584mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology