Basic Information
Locus ID:
Thhalv10012525m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
UBA2
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_2 | 1957592 | 1961894 | + | Thhalv10012525m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 119,426.91 Da | 34.84 | 85.33 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 486 | 1025 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 69 | 454 | 1.47352E-155 | - |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 244 | 315 | 8.5E-28 | IPR032418 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 316 | 385 | 1.7E-23 | IPR032420 |
| Pfam | PF00899 | ThiF family | 467 | 966 | 2.0E-73 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 978 | 1067 | 7.9E-22 | IPR018965 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 654 | 907 | 6.7E-82 | IPR019572 |
| Pfam | PF00899 | ThiF family | 71 | 445 | 1.9E-28 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 64 | 451 | 2.75E-97 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 462 | 962 | 3.63E-127 | IPR035985 |
| Gene3D | G3DSA:3.40.50.720 | - | 487 | 965 | 1.9E-190 | - |
| Gene3D | G3DSA:3.40.50.12550 | - | 189 | 477 | 3.1E-112 | - |
| Gene3D | G3DSA:3.50.50.80 | - | 60 | 178 | 6.0E-36 | IPR042449 |
| Gene3D | G3DSA:1.10.10.2660 | - | 639 | 914 | 1.9E-190 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 232 | 313 | 3.1E-112 | IPR042302 |
| Gene3D | G3DSA:3.10.290.60 | - | 980 | 1070 | 9.7E-21 | IPR038252 |
| SMART | SM00985 | UBA_e1_C_a_2 | 945 | 1067 | 1.4E-53 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 64 | 1071 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 646 | 654 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 429 | 437 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 514 | 537 | 2.3E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 91 | 115 | 2.3E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 715 | 742 | 2.3E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 206 | 233 | 2.3E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 561 | 586 | 2.3E-66 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_006399119.1 | ubiquitin-activating enzyme E1 2 [Eutrema salsugineum] | 0 |
| P92974 | Ubiquitin-activating enzyme E1 2 OS=Arabidopsis thaliana OX=3702 GN=UBA2 PE=1 SV=1 | 0 | |
| TrEMBL | V4LDW3 | E1 ubiquitin-activating enzyme OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012525mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology