Basic Information
Locus ID:
Thhalv10012364m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Contains the following InterPro domains Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro IPR015609), Heat shock protein DnaJ, N-terminal (InterPro IPR001623), Heat shock protein DnaJ (InterPro IPR003095)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 10919088 | 10920065 | - | Thhalv10012364m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 37,396.52 Da | 41.63 | 72.92 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 118 | 5.4461E-17 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 124 | 3.2E-16 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 64 | 123 | 7.07E-18 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 63 | 169 | 1.9E-17 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 2.3E-19 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 135 | 13.997812 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 5.1E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 5.1E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 5.1E-10 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 230 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19570.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_006393695.2 | uncharacterized protein LOC18010913 [Eutrema salsugineum] | 0 |
| Q921R4 | DnaJ homolog subfamily C member 14 OS=Mus musculus OX=10090 GN=Dnajc14 PE=2 SV=2 | 0 | |
| TrEMBL | V4MI35 | J domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012364mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology