Basic Information
Locus ID:
Thhalv10012173m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 2829102 | 2831407 | - | Thhalv10012173m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 76,453.58 Da | 43.23 | 88.36 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 135 | 195 | 1.5E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 374 | 642 | 3.0E-26 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 85 | 4.5E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 647 | 1.39E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 70 | 229 | 6.46E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 665 | 1.4E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 446 | 3.5E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 251 | 1.0E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 205 | 1.5E-32 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 647 | 26.421406 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50610.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006393130.1 | pollen receptor-like kinase 5 [Eutrema salsugineum] | 0 |
| Q9LPT1 | Pollen receptor-like kinase 5 OS=Arabidopsis thaliana OX=3702 GN=PRK5 PE=1 SV=1 | 0 | |
| TrEMBL | V4MGF9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012173mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology