Basic Information
Locus ID:
Thhalv10012077m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 7095205 | 7097445 | + | Thhalv10012077m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 48,775.01 Da | 41.09 | 76.99 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 103 | 449 | 3.5434E-85 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 104 | 277 | 1.1E-59 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 300 | 445 | 4.6E-30 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 99 | 450 | 4.98E-95 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 276 | 452 | 6.4E-48 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 79 | 275 | 3.1E-57 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 104 | 445 | 45.799305 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 331 | 342 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 119 | 130 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_024006337.1 | aspartic proteinase CDR1 [Eutrema salsugineum] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | V4KTX5 | Peptidase A1 domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012077mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology