Basic Information
Locus ID:
Thhalv10012006m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 62707 | 68308 | + | Thhalv10012006m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 111,150.14 Da | 39.88 | 93.53 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 696 | 961 | 1.67935E-83 | - |
| Pfam | PF11721 | Malectin domain | 424 | 609 | 3.6E-40 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 693 | 898 | 3.3E-45 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 105 | 394 | 9.86E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 959 | 3.69E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 978 | 2.2E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 298 | 1.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 399 | 2.5E-21 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 422 | 613 | 2.9E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 54 | 196 | 4.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 652 | 765 | 1.2E-35 | - |
| SMART | SM00220 | serkin_6 | 690 | 959 | 7.5E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 965 | 36.753361 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 6.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56145.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_006392561.2 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Eutrema salsugineum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | V4KIW6 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012006mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology