Basic Information
Locus ID:
Thhalv10011602m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
PTI1-like tyrosine-protein kinase At3g15890
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 1583559 | 1585187 | + | Thhalv10011602m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 40,751.74 Da | 43.38 | 82.56 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 46 | 316 | 6.859E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 42 | 314 | 1.6E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 314 | 5.93E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 334 | 3.0E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 10 | 115 | 1.2E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 331 | 34.46365 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 68 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 162 | 174 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 360 | - | - |
| Coils | Coil | Coil | 308 | 328 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006392910.1 | PTI1-like tyrosine-protein kinase At3g15890 [Eutrema salsugineum] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | V4MFW2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011602mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology