Basic Information
Locus ID:
Thhalv10011588m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
mitogen-activated protein kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 2117596 | 2121100 | - | Thhalv10011588m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 40,240.29 Da | 69.84 | 79.70 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 78 | 340 | 2.71501E-148 | - |
| Pfam | PF00069 | Protein kinase domain | 83 | 335 | 1.2E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 363 | 1.28E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 159 | 6.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 164 | 353 | 4.8E-52 | - |
| SMART | SM00220 | serkin_6 | 80 | 335 | 1.0E-85 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 80 | 335 | 46.364479 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 86 | 109 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 193 | 205 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51660.1 | mitogen-activated protein kinase kinase 4. Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 0 |
| RefSeq | XP_024006239.1 | mitogen-activated protein kinase kinase 4 [Eutrema salsugineum] | 0 |
| O80397 | Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana OX=3702 GN=MKK4 PE=1 SV=1 | 0 | |
| TrEMBL | E4MVW2 | mRNA, clone: RTFL01-04-O19 OS=Eutrema halophilum OX=98038 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology