Basic Information
Locus ID:
Thhalv10011327m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 3618220 | 3621001 | - | Thhalv10011327m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 67,986.78 Da | 55.32 | 82.35 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 153 | 413 | 1.51554E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 154 | 414 | 3.1E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 447 | 596 | 9.52E-15 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 144 | 449 | 1.62E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 440 | 594 | 2.5E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 145 | 241 | 1.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 434 | 1.5E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 435 | 524 | 2.5E-16 | - |
| SMART | SM00220 | serkin_6 | 152 | 414 | 4.3E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 152 | 414 | 50.534008 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 158 | 184 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 276 | 288 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 88 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49580.1 | Calcium-dependent protein kinase (CDPK) family protein. | 0 |
| RefSeq | XP_006393243.1 | CDPK-related kinase 8 [Eutrema salsugineum] | 0 |
| Q9FX86 | CDPK-related kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=2 SV=1 | 0 | |
| TrEMBL | V4KH88 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011327mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology