Basic Information
Locus ID:
Thhalv10011300m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
ATP binding kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 5239101 | 5241790 | - | Thhalv10011300m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 71,263.50 Da | 34.58 | 92.15 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 378 | 644 | 2.20099E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 1.2E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 75 | 131 | 1.3E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 375 | 639 | 3.6E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 376 | 645 | 3.23E-60 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 213 | 6.8E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 446 | 7.0E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 655 | 6.4E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 188 | 1.7E-42 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 168 | 190 | 7.119001 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 644 | 33.446003 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 378 | 400 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 258 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_006393400.1 | probable inactive receptor kinase At1g48480 [Eutrema salsugineum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | V4MHA2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011300mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology