Basic Information
Locus ID:
Thhalv10011200m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_7 | 10383924 | 10390839 | + | Thhalv10011200m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 120,025.95 Da | 44.19 | 77.68 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 680 | 964 | 6.33183E-163 | - |
| Pfam | PF00069 | Protein kinase domain | 674 | 959 | 3.8E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 671 | 997 | 8.36E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 1003 | 1.9E-108 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 754 | 976 | 1.9E-108 | - |
| SMART | SM00220 | serkin_6 | 674 | 959 | 7.1E-106 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 960 | 1048 | 8.773577 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 674 | 959 | 52.145287 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 793 | 805 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 832 | 858 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 62 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G45160.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006393667.1 | probable serine/threonine protein kinase IRE4 [Eutrema salsugineum] | 0 |
| F4HPN2 | Probable serine/threonine protein kinase IRE4 OS=Arabidopsis thaliana OX=3702 GN=IRE4 PE=2 SV=1 | 0 | |
| TrEMBL | V4KU83 | Serine/threonine protein kinase IRE4 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011200mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology