Basic Information
Locus ID:
Thhalv10011161m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_16 | 1719245 | 1720330 | - | Thhalv10011161m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 39,204.84 Da | 39.98 | 94.24 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 60 | 326 | 1.3E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 329 | 1.5E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 345 | 1.1E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 23 | 132 | 6.8E-19 | - |
| SMART | SM00220 | serkin_6 | 58 | 329 | 3.6E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 58 | 329 | 34.661526 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 64 | 85 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 40 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51990.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006403855.1 | serine/threonine-protein kinase-like protein At3g51990 [Eutrema salsugineum] | 0 |
| Q9SV05 | Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana OX=3702 GN=At3g51990 PE=2 SV=1 | 0 | |
| TrEMBL | V4LZG3 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011161mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology