Basic Information
Locus ID:
Thhalv10011053m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_16 | 2299273 | 2301489 | + | Thhalv10011053m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 44,784.89 Da | 51.25 | 86.97 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 53 | 306 | 4.59742E-105 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 49 | 304 | 1.0E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 37 | 316 | 7.19E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 30 | 331 | 5.7E-80 | - |
| SMART | SM00220 | serkin_6 | 47 | 313 | 1.3E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 310 | 42.44936 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 75 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 162 | 180 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 124 | 137 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 235 | 257 | 1.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 277 | 299 | 1.5E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04013 (MAPK signaling pathway - fly)
map04013 (MAPK signaling pathway - fly)
map04064 (NF-kappa B signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04214 (Apoptosis - fly)
map04214 (Apoptosis - fly)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
map04620 (Toll-like receptor signaling pathway)
map04621 (NOD-like receptor signaling pathway)
map04622 (RIG-I-like receptor signaling pathway)
ko04624 (Toll and Imd signaling pathway)
map04624 (Toll and Imd signaling pathway)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04668 (TNF signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006404009.1 | serine/threonine-protein kinase STY17 [Eutrema salsugineum] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | V4LSI3 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011053mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology