Basic Information
Locus ID:
Thhalv10011043m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
F-box LRR-repeat kelch-repeat protein At1g11620
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_16 | 2279452 | 2281741 | - | Thhalv10011043m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 29,385.33 Da | 33.00 | 85.55 | -0.25 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16590.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_018512813.2 | putative F-box/LRR-repeat/kelch-repeat protein At1g11620 [Brassica rapa] | 0 |
| Q9LUS5 | Putative F-box protein At3g16590 OS=Arabidopsis thaliana OX=3702 GN=At3g16590 PE=4 SV=1 | 0 | |
| TrEMBL | V4LZV5 | FBA_1 domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10011043mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G31510.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10000539m.g.v1.0, Thhalv10011016m.g.v1.0 ... |
| Brassicaceae | Brassica nigra | 5 | BniB02g006350.2N, BniB08g012450.2N, BniB08g064620.2N ... |