Basic Information
Locus ID:
Thhalv10010300m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_16 | 4838677 | 4840449 | - | Thhalv10010300m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 57,716.75 Da | 45.81 | 78.39 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 199 | 445 | 1.03044E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 195 | 445 | 2.4E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 175 | 445 | 2.73E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 272 | 476 | 3.0E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 183 | 271 | 5.6E-14 | - |
| SMART | SM00220 | serkin_6 | 192 | 448 | 9.6E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 192 | 448 | 39.537758 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 313 | 325 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 372 | 394 | 4.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 416 | 438 | 4.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 353 | 363 | 4.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 307 | 325 | 4.3E-20 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 269 | 282 | 4.3E-20 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 121 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46930.2 | - | 0 |
| RefSeq | XP_006404431.1 | serine/threonine-protein kinase HT1 [Eutrema salsugineum] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | V4LQ03 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10010300mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology