Basic Information
Locus ID:
Thhalv10010211m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_16 | 2420436 | 2423730 | - | Thhalv10010211m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 68,033.67 Da | 49.04 | 79.79 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 161 | 422 | 1.94327E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 161 | 423 | 6.5E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 451 | 605 | 1.57E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 159 | 458 | 3.91E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 154 | 250 | 2.4E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 441 | 532 | 2.9E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 448 | 602 | 2.9E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 251 | 439 | 8.8E-63 | - |
| SMART | SM00220 | serkin_6 | 161 | 423 | 2.6E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 161 | 423 | 51.565792 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 167 | 193 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 285 | 297 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_006404024.1 | CDPK-related kinase 5 isoform X2 [Eutrema salsugineum] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | V4LSN8 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10010211mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology