Basic Information
Locus ID:
Thhalv10009697m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 9746004 | 9747231 | - | Thhalv10009697m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 36,223.88 Da | 48.89 | 65.35 | -0.85 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16770.1 | 0 | |
| RefSeq | XP_006416782.1 | uncharacterized protein LOC18993217 isoform X1 [Eutrema salsugineum] | 0 |
| TrEMBL | V4KBQ4 | Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009697mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_5501 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028579 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg26779, Sbi_jg26780, Sbi_jg33787 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8479 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011717 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73636, Sgl77100 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000007632, gene:ENSEOMG00000034489 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0007860, CQ.Regalona.r1.9BG0008150 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30028380, pistato.v30132220 |
| Apiaceae | Apium graveolens | 2 | Ag11G03959, Ag3G02673 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G019770 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103713130 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3547.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G34104 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G16770.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10009697m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g14920.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g006770.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1060 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1102 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0064s00016.v1.0, Dusal.0064s00017.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.619 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00019873 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G15469 |
| Poaceae | Echinochloa crus-galli | 4 | AH01.3419, BH01.3772, BH07.4227, CH01.4022 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0101380, gene-QOZ80_2BG0154720 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0557570.1 |
| Poaceae | Oryza coarctata | 2 | Oco03G002240, Oco04G002170 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g04780.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G150900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0207623 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G245600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG014660, gene_TRIDC6BG020030 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G111700.1, TraesCS6B02G139800.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb328020_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-33751 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12181 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.1224, evm.TU.LG12.562 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-10255 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13119 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17767 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.924 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3085 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11479 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632699 |
| Solanaceae | Solanum chilense | 1 | SOLCI001789200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107013812 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4393 |