Basic Information
Locus ID:
Thhalv10009550m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 7645252 | 7647129 | - | Thhalv10009550m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 65,006.49 Da | 40.38 | 98.09 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 262 | 537 | 2.04499E-87 | - |
| Pfam | PF13855 | Leucine rich repeat | 113 | 153 | 4.2E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 259 | 531 | 2.8E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 160 | 2.46E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 238 | 538 | 2.56E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 56 | 177 | 3.1E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 334 | 556 | 3.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 216 | 333 | 5.0E-33 | - |
| SMART | SM00220 | serkin_6 | 256 | 534 | 7.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 256 | 543 | 39.834572 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 118 | 141 | 7.265315 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 383 | 395 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 140 | 153 | 3.5E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 119 | 132 | 3.5E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24650.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024008045.1 | receptor-like kinase TMK2 [Eutrema salsugineum] | 0 |
| Q9FYK0 | Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1 | 0 | |
| TrEMBL | V4KX07 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009550mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology