Basic Information
Locus ID:
Thhalv10009494m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Contains the following InterPro domains UspA (InterPro IPR006016), Serine threonine-protein kinase domain (InterPro IPR002290), Serine-threonine tyrosine-protein kinase (InterPro IPR001245), Serine threonine-protein kinase, active site (InterPro IPR008271), Protein kinase-like domain (InterPro IPR011009), Rossmann-like alpha beta alpha sandwich fold (InterPro IPR014729), Protein kinase, catalytic domain (InterPro IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro IPR020635)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 9747996 | 9751059 | - | Thhalv10009494m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 79,706.58 Da | 50.71 | 77.85 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 158 | 2.57147E-60 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 434 | 685 | 3.1E-39 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 19 | 146 | 5.4E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 155 | 1.67E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 685 | 2.6E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 402 | 503 | 4.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 504 | 707 | 8.9E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 18 | 155 | 2.1E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 431 | 690 | 2.9E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 431 | 693 | 35.19862 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 549 | 561 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 265 | - | - |
| Coils | Coil | Coil | 303 | 323 | - | - |
| Coils | Coil | Coil | 363 | 392 | - | - |
| Coils | Coil | Coil | 329 | 361 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16760.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_024008625.1 | U-box domain-containing protein 52 [Eutrema salsugineum] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | V4MTJ1 | Protein kinase domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009494mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology