Basic Information
Locus ID:
Thhalv10009403m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 2757575 | 2758510 | - | Thhalv10009403m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 34,647.35 Da | 53.03 | 90.84 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 56 | 307 | 2.5E-57 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 309 | 8.23E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 47 | 311 | 2.0E-68 | - |
| SMART | SM00220 | serkin_6 | 55 | 307 | 3.6E-73 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 307 | 41.078365 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 84 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32320.1 | MAP kinase kinase 10. member of MAP Kinase Kinase | 0 |
| RefSeq | XP_006415218.1 | mitogen-activated protein kinase kinase 10 [Eutrema salsugineum] | 0 |
| Q9LQM8 | Mitogen-activated protein kinase kinase 10 OS=Arabidopsis thaliana OX=3702 GN=MKK10 PE=1 SV=1 | 0 | |
| TrEMBL | V4MPM2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009403mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology