Basic Information
Locus ID:
Thhalv10009373m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 12056591 | 12058374 | - | Thhalv10009373m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 42,713.14 Da | 42.87 | 88.03 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 63 | 274 | 7.3E-36 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 354 | 5.19E-59 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 136 | 1.7E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 137 | 353 | 7.7E-42 | - |
| SMART | SM00220 | serkin_6 | 60 | 352 | 1.0E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 352 | 31.340038 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 35 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_024008496.1 | serine/threonine-protein kinase PBS1 [Eutrema salsugineum] | 0 |
| Q9LQQ8 | Probable serine/threonine-protein kinase PBL5 OS=Arabidopsis thaliana OX=3702 GN=PBL5 PE=2 SV=1 | 0 | |
| TrEMBL | V4KWR1 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009373mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G60080.1, AT5G60090.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10009373m.g.v1.0, Thhalv10013099m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g21740.v2.2, Sp6g21750.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB02g039790.2N, BniB02g039820.2N, BniB05g040380.2N ... |