Basic Information
Locus ID:
Thhalv10009136m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 7748645 | 7749947 | - | Thhalv10009136m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 13,148.18 Da | 48.88 | 88.39 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 7 | 94 | 3.13383E-49 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 116 | 3.7E-44 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 95 | 7.14E-29 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 3.0E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 4.4E-52 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 75 | 10.614717 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_006416236.1 | membrane-anchored ubiquitin-fold protein 6 [Eutrema salsugineum] | 0 |
| Q8GWJ6 | Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1 | 0 | |
| TrEMBL | V4KTH9 | Membrane-anchored ubiquitin-fold protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10009136mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology