Basic Information
Locus ID:
Thhalv10008512m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 7025720 | 7027482 | + | Thhalv10008512m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.63 | 29,139.24 Da | 28.73 | 91.87 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 117 | 3.61E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 12 | 81 | 1.1E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 82 | 170 | 6.8E-8 | - |
| Coils | Coil | Coil | 222 | 262 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G23700.2 | - | 0 |
| RefSeq | XP_024008606.1 | uncharacterized protein LOC18992589 [Eutrema salsugineum] | 0 |
| O23304 | Serine/threonine-protein kinase BLUS1 OS=Arabidopsis thaliana OX=3702 GN=BLUS1 PE=1 SV=1 | 0 | |
| TrEMBL | V4MRL6 | PK_Tyr_Ser-Thr domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10008512mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10008512m.g.v1.0 |
| Brassicaceae | Brassica nigra | 2 | BniB02g012750.2N, BniB05g064580.2N |