Basic Information
Locus ID:
Thhalv10008027m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 10063639 | 10065017 | - | Thhalv10008027m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 39,864.73 Da | 44.50 | 79.75 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 111 | 153 | 1.8E-7 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 170 | 203 | 1.6E-5 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 77 | 339 | 2.22E-41 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 49 | 352 | 3.6E-36 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 0.021 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 0.11 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_006416889.1 | F-box/kelch-repeat protein At1g15670 [Eutrema salsugineum] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | V4KYX9 | F-box domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10008027mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology