Basic Information
Locus ID:
Thhalv10007579m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 12526870 | 12528848 | + | Thhalv10007579m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 51,846.90 Da | 46.86 | 92.62 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 159 | 425 | 1.30532E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 154 | 422 | 1.4E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 136 | 431 | 5.52E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 229 | 436 | 1.4E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 133 | 228 | 3.8E-34 | - |
| SMART | SM00220 | serkin_6 | 153 | 424 | 1.4E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 430 | 38.350502 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 275 | 287 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 159 | 182 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 456 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09440.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006417572.1 | probable receptor-like protein kinase At2g42960 [Eutrema salsugineum] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | V4KDV8 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10007579mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology