Basic Information
Locus ID:
Thhalv10007428m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Short Name:
WRKY4
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 10719471 | 10721984 | - | Thhalv10007428m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 54,616.77 Da | 57.53 | 56.30 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 225 | 281 | 2.0E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 404 | 461 | 3.3E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 223 | 283 | 2.62E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 395 | 463 | 1.18E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 388 | 464 | 2.8E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 211 | 284 | 5.5E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 224 | 282 | 6.6E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 403 | 462 | 3.2E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 225 | 283 | 24.856667 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 398 | 463 | 38.319656 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 199 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_006417073.1 | probable WRKY transcription factor 4 [Eutrema salsugineum] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | V4MU44 | WRKY transcription factor 3 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10007428mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology