Basic Information
Locus ID:
Thhalv10007368m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 6732692 | 6736137 | - | Thhalv10007368m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 57,973.12 Da | 47.78 | 67.66 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 232 | 373 | 4.1E-73 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 144 | 2.1E-73 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 5 | 144 | 1.31E-20 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 236 | 371 | 3.27E-25 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 236 | 375 | 3.4E-18 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 144 | 1.5E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 188 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_006416000.1 | uncharacterized protein LOC18992529 [Eutrema salsugineum] | 0 |
| TrEMBL | V4L3M5 | Actin cross-linking OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10007368mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology