Basic Information
Locus ID:
Thhalv10007242m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 4196729 | 4200946 | - | Thhalv10007242m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 65,326.01 Da | 49.20 | 72.96 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 118 | 487 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 442 | 486 | 1.6E-4 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 121 | 423 | 1.2E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 475 | 7.01E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 207 | 440 | 2.2E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 110 | 206 | 3.2E-37 | - |
| SMART | SM00133 | pkinase_C_6 | 424 | 488 | 7.1E-9 | IPR000961 |
| SMART | SM00220 | serkin_6 | 120 | 423 | 2.6E-104 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 120 | 423 | 48.244301 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 424 | 496 | 13.648321 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 126 | 149 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 239 | 251 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30640.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_006415440.1 | serine/threonine-protein kinase tricorner [Eutrema salsugineum] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | V4L215 | Serine/threonine-protein kinase tricorner-like OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10007242mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology