Basic Information
Locus ID:
Thhalv10007188m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Protein kinase C terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 14618548 | 14621543 | - | Thhalv10007188m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 66,304.22 Da | 42.06 | 67.74 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 134 | 503 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 137 | 285 | 3.3E-41 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 458 | 502 | 1.7E-7 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 333 | 439 | 2.2E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 109 | 493 | 4.99E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 107 | 219 | 3.3E-70 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 338 | 457 | 3.5E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 458 | 468 | 3.5E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 220 | 289 | 3.3E-70 | - |
| SMART | SM00133 | pkinase_C_6 | 440 | 504 | 1.0E-7 | IPR000961 |
| SMART | SM00220 | serkin_6 | 136 | 439 | 3.5E-103 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 440 | 512 | 14.809753 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 136 | 439 | 47.325592 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 142 | 165 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 535 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 78 | 98 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_024008387.1 | serine/threonine-protein kinase 38-like [Eutrema salsugineum] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 0 | |
| TrEMBL | V4KYU7 | Serine/threonine-protein kinase tricorner OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10007188mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology