Basic Information
Locus ID:
Thhalv10006893m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 7959162 | 7962900 | + | Thhalv10006893m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 83,411.81 Da | 42.84 | 89.43 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 24 | 147 | 2.82437E-7 | - |
| CDD | cd14066 | STKc_IRAK | 413 | 680 | 1.88662E-85 | - |
| Pfam | PF00582 | Universal stress protein family | 16 | 147 | 5.1E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 411 | 675 | 1.0E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 678 | 1.07E-76 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 16 | 147 | 8.06E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 700 | 2.8E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 371 | 481 | 2.9E-29 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 151 | 1.2E-5 | IPR014729 |
| SMART | SM00220 | serkin_6 | 407 | 685 | 4.9E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 407 | 685 | 37.884079 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 528 | 540 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 413 | 435 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 347 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21590.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_006416287.1 | putative proline-rich receptor-like protein kinase PERK11 [Eutrema salsugineum] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | V4KAD9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006893mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology