Basic Information
Locus ID:
Thhalv10006880m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
ion transport
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 12280831 | 12286965 | + | Thhalv10006880m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 86,658.39 Da | 47.84 | 101.19 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 165 | 3.1E-35 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 186 | 342 | 1.3E-20 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 353 | 620 | 1.6E-71 | IPR003864 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 717 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10090.1 | Early-responsive to dehydration stress protein (ERD4). | 0 |
| RefSeq | XP_006417497.1 | CSC1-like protein At1g10090 [Eutrema salsugineum] | 0 |
| Q94A87 | CSC1-like protein At1g10090 OS=Arabidopsis thaliana OX=3702 GN=At1g10090 PE=1 SV=1 | 0 | |
| TrEMBL | V4KDN9 | CSC1-like protein RXW8 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006880mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology