Basic Information
Locus ID:
Thhalv10006679m.g.v1.0
Species & Taxonomic ID:
Eutrema salsugineum & 72664
Genome Assembly:
GCF_000478725.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_5 | 12617378 | 12624145 | + | Thhalv10006679m.g.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 110,271.62 Da | 46.55 | 78.87 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 436 | 548 | 1.3E-26 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 549 | 719 | 1.5E-60 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 56 | 175 | 1.4E-16 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 56 | 190 | 8.51E-25 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 430 | 757 | 1.93E-105 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 374 | 548 | 7.5E-43 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 51 | 175 | 3.0E-26 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 549 | 762 | 1.2E-74 | IPR036961 |
| SMART | SM00033 | ch_5 | 55 | 173 | 1.8E-11 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 428 | 728 | 1.1E-137 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 430 | 720 | 93.630562 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 53 | 175 | 18.971296 | IPR001715 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 620 | 631 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 590 | 607 | 4.6E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 621 | 639 | 4.6E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 504 | 525 | 4.6E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 670 | 691 | 4.6E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 830 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 976 | 1000 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 933 | 959 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 829 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 933 | 1000 | - | - |
| Coils | Coil | Coil | 727 | 754 | - | - |
| Coils | Coil | Coil | 410 | 430 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09170.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_006417601.1 | kinesin-like protein KIN-14H isoform X2 [Eutrema salsugineum] | 0 |
| F4HZF0 | Kinesin-like protein KIN-14H OS=Arabidopsis thaliana OX=3702 GN=KIN14H PE=3 SV=2 | 0 | |
| TrEMBL | V4KX74 | Kinesin-like protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10006679mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology